Review





Similar Products

bootscan analysis simplot software v3.5  (Simplot Science)
90
Simplot Science bootscan analysis simplot software v3.5
Bootscan Analysis Simplot Software V3.5, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pm39681761-64-0-6?v=Simplot+Science
Average 90 stars, based on 1 article reviews
bootscan analysis simplot software v3.5 - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier
bootscan in simplot software  (Simplot Science)
90
Simplot Science bootscan in simplot software
Bootscan In Simplot Software, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pm39591322-80-18-20?v=Simplot+Science
Average 90 stars, based on 1 article reviews
bootscan in simplot software - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier
similarity plots and bootscan analyses simplot software package v3.5.1  (Simplot Science)
90
Simplot Science similarity plots and bootscan analyses simplot software package v3.5.1
Similarity Plots And Bootscan Analyses Simplot Software Package V3.5.1, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pm39342978-76-17-24?v=Simplot+Science
Average 90 stars, based on 1 article reviews
similarity plots and bootscan analyses simplot software package v3.5.1 - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier
bootscan analysis of simplot software  (Simplot Science)
90
Simplot Science bootscan analysis of simplot software
Bootscan Analysis Of Simplot Software, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pm39288718-143-21-24?v=Simplot+Science
Average 90 stars, based on 1 article reviews
bootscan analysis of simplot software - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier
bootscan graphs generated by simplot software version 3.5.1  (Simplot Science)
90
Simplot Science bootscan graphs generated by simplot software version 3.5.1
Bootscan Graphs Generated By Simplot Software Version 3.5.1, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pm38675902-146-2-6?v=Simplot+Science
Average 90 stars, based on 1 article reviews
bootscan graphs generated by simplot software version 3.5.1 - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier
bootscan simplot software v3.5.1  (Simplot Science)
90
Simplot Science bootscan simplot software v3.5.1
Bootscan Simplot Software V3.5.1, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pm38587697-28-28-29?v=Simplot+Science
Average 90 stars, based on 1 article reviews
bootscan simplot software v3.5.1 - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier
bootscan software  (Simplot Science)
90
Simplot Science bootscan software
Similarity plots and <t>Bootscan</t> analyses of potential HCV recombinants determined on the basis of the IRES complete sequence using Simplot version 3.5.1 and Simplot ++ V1.3 software. Simplot++ analyses (left panels) display the percentage of sequence similarity over the IRES sequences of the HCV genome (nucleotide positions 41 to 359 according to strain 1a H77 numbering). Bootscan analysis (right panels) shows the percentage of permuted trees (y-axis). This approach permits to observe levels of phylogenetic relatedness between a query sequence and a reference sequence in different genomic regions. Query sequences (shown on the upper part of the figure) correspond to ( A ) clone B12 (putative 1a/3a recombinant), ( B ) clone C4 (putative 3a/1a recombinant), and ( C ) clone A33 (putative 3a/1a recombinant). Reference and/or putative parental sequences are indicated in purple for genotype 1a (strain H77, NCBI Accession No. AF009606) and green for genotype 3a (strain NZL1, NCBI Accession No. D17763). All analyses were performed using a 100 bp sliding window and a 10 bp step size. For Simplot++ analyses, a GTR optimized model of nucleotide substitution was employed, whereas for Bootscan, a Kimura two-parameter model was used.
Bootscan Software, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pmc11053413-110-2-6?v=Simplot+Science
Average 90 stars, based on 1 article reviews
bootscan software - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier
bootscan analysis using simplot 3.5.1 software  (Simplot Science)
90
Simplot Science bootscan analysis using simplot 3.5.1 software
Similarity plots and <t>Bootscan</t> analyses of potential HCV recombinants determined on the basis of the IRES complete sequence using Simplot version 3.5.1 and Simplot ++ V1.3 software. Simplot++ analyses (left panels) display the percentage of sequence similarity over the IRES sequences of the HCV genome (nucleotide positions 41 to 359 according to strain 1a H77 numbering). Bootscan analysis (right panels) shows the percentage of permuted trees (y-axis). This approach permits to observe levels of phylogenetic relatedness between a query sequence and a reference sequence in different genomic regions. Query sequences (shown on the upper part of the figure) correspond to ( A ) clone B12 (putative 1a/3a recombinant), ( B ) clone C4 (putative 3a/1a recombinant), and ( C ) clone A33 (putative 3a/1a recombinant). Reference and/or putative parental sequences are indicated in purple for genotype 1a (strain H77, NCBI Accession No. AF009606) and green for genotype 3a (strain NZL1, NCBI Accession No. D17763). All analyses were performed using a 100 bp sliding window and a 10 bp step size. For Simplot++ analyses, a GTR optimized model of nucleotide substitution was employed, whereas for Bootscan, a Kimura two-parameter model was used.
Bootscan Analysis Using Simplot 3.5.1 Software, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pmc10810781-112-7-6?v=Simplot+Science
Average 90 stars, based on 1 article reviews
bootscan analysis using simplot 3.5.1 software - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier
similarity plot and bootscan analyses in simplot software  (Simplot Science)
90
Simplot Science similarity plot and bootscan analyses in simplot software
Similarity plots and <t>Bootscan</t> analyses of potential HCV recombinants determined on the basis of the IRES complete sequence using Simplot version 3.5.1 and Simplot ++ V1.3 software. Simplot++ analyses (left panels) display the percentage of sequence similarity over the IRES sequences of the HCV genome (nucleotide positions 41 to 359 according to strain 1a H77 numbering). Bootscan analysis (right panels) shows the percentage of permuted trees (y-axis). This approach permits to observe levels of phylogenetic relatedness between a query sequence and a reference sequence in different genomic regions. Query sequences (shown on the upper part of the figure) correspond to ( A ) clone B12 (putative 1a/3a recombinant), ( B ) clone C4 (putative 3a/1a recombinant), and ( C ) clone A33 (putative 3a/1a recombinant). Reference and/or putative parental sequences are indicated in purple for genotype 1a (strain H77, NCBI Accession No. AF009606) and green for genotype 3a (strain NZL1, NCBI Accession No. D17763). All analyses were performed using a 100 bp sliding window and a 10 bp step size. For Simplot++ analyses, a GTR optimized model of nucleotide substitution was employed, whereas for Bootscan, a Kimura two-parameter model was used.
Similarity Plot And Bootscan Analyses In Simplot Software, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pm36564834-155-17-17?v=Simplot+Science
Average 90 stars, based on 1 article reviews
similarity plot and bootscan analyses in simplot software - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier
bootscanning and informative site performed by simplot 3.5.1 software  (Simplot Science)
90
Simplot Science bootscanning and informative site performed by simplot 3.5.1 software
Similarity plots and <t>Bootscan</t> analyses of potential HCV recombinants determined on the basis of the IRES complete sequence using Simplot version 3.5.1 and Simplot ++ V1.3 software. Simplot++ analyses (left panels) display the percentage of sequence similarity over the IRES sequences of the HCV genome (nucleotide positions 41 to 359 according to strain 1a H77 numbering). Bootscan analysis (right panels) shows the percentage of permuted trees (y-axis). This approach permits to observe levels of phylogenetic relatedness between a query sequence and a reference sequence in different genomic regions. Query sequences (shown on the upper part of the figure) correspond to ( A ) clone B12 (putative 1a/3a recombinant), ( B ) clone C4 (putative 3a/1a recombinant), and ( C ) clone A33 (putative 3a/1a recombinant). Reference and/or putative parental sequences are indicated in purple for genotype 1a (strain H77, NCBI Accession No. AF009606) and green for genotype 3a (strain NZL1, NCBI Accession No. D17763). All analyses were performed using a 100 bp sliding window and a 10 bp step size. For Simplot++ analyses, a GTR optimized model of nucleotide substitution was employed, whereas for Bootscan, a Kimura two-parameter model was used.
Bootscanning And Informative Site Performed By Simplot 3.5.1 Software, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+software/pm32115719-25-16-15?v=Simplot+Science
Average 90 stars, based on 1 article reviews
bootscanning and informative site performed by simplot 3.5.1 software - by Bioz Stars, 2026-08
90/100 stars
  Buy from Supplier

Image Search Results


Similarity plots and Bootscan analyses of potential HCV recombinants determined on the basis of the IRES complete sequence using Simplot version 3.5.1 and Simplot ++ V1.3 software. Simplot++ analyses (left panels) display the percentage of sequence similarity over the IRES sequences of the HCV genome (nucleotide positions 41 to 359 according to strain 1a H77 numbering). Bootscan analysis (right panels) shows the percentage of permuted trees (y-axis). This approach permits to observe levels of phylogenetic relatedness between a query sequence and a reference sequence in different genomic regions. Query sequences (shown on the upper part of the figure) correspond to ( A ) clone B12 (putative 1a/3a recombinant), ( B ) clone C4 (putative 3a/1a recombinant), and ( C ) clone A33 (putative 3a/1a recombinant). Reference and/or putative parental sequences are indicated in purple for genotype 1a (strain H77, NCBI Accession No. AF009606) and green for genotype 3a (strain NZL1, NCBI Accession No. D17763). All analyses were performed using a 100 bp sliding window and a 10 bp step size. For Simplot++ analyses, a GTR optimized model of nucleotide substitution was employed, whereas for Bootscan, a Kimura two-parameter model was used.

Journal: Viruses

Article Title: Mixed Infections Unravel Novel HCV Inter-Genotypic Recombinant Forms within the Conserved IRES Region

doi: 10.3390/v16040560

Figure Lengend Snippet: Similarity plots and Bootscan analyses of potential HCV recombinants determined on the basis of the IRES complete sequence using Simplot version 3.5.1 and Simplot ++ V1.3 software. Simplot++ analyses (left panels) display the percentage of sequence similarity over the IRES sequences of the HCV genome (nucleotide positions 41 to 359 according to strain 1a H77 numbering). Bootscan analysis (right panels) shows the percentage of permuted trees (y-axis). This approach permits to observe levels of phylogenetic relatedness between a query sequence and a reference sequence in different genomic regions. Query sequences (shown on the upper part of the figure) correspond to ( A ) clone B12 (putative 1a/3a recombinant), ( B ) clone C4 (putative 3a/1a recombinant), and ( C ) clone A33 (putative 3a/1a recombinant). Reference and/or putative parental sequences are indicated in purple for genotype 1a (strain H77, NCBI Accession No. AF009606) and green for genotype 3a (strain NZL1, NCBI Accession No. D17763). All analyses were performed using a 100 bp sliding window and a 10 bp step size. For Simplot++ analyses, a GTR optimized model of nucleotide substitution was employed, whereas for Bootscan, a Kimura two-parameter model was used.

Article Snippet: Moreover, the Bootscan graphs generated by Simplot software (version 3.5.1) indicated similar results ( , right panels).

Techniques: Sequencing, Software, Recombinant

Recombination events detected by RDP4 in HCV IRES clones from sample 05.

Journal: Viruses

Article Title: Mixed Infections Unravel Novel HCV Inter-Genotypic Recombinant Forms within the Conserved IRES Region

doi: 10.3390/v16040560

Figure Lengend Snippet: Recombination events detected by RDP4 in HCV IRES clones from sample 05.

Article Snippet: Moreover, the Bootscan graphs generated by Simplot software (version 3.5.1) indicated similar results ( , right panels).

Techniques: Clone Assay, Recombinant, Sequencing